Dr. Giovanni Scardoni

CBMC Center for BioMedical Computing (www.cbmc.it)

University of Verona, Strada le Grazie 8, 37134, Verona, Italy

e-mail: giovanni.scardoni@gmail.com

phone: +39 3291526396

Cytoscape plug-ins

• CentiScaPe: Centralities for Cytoscape

  A plug-in for calculating network centralities with numerical and graphic output.
  Go to CentiScaPe page to download the latest version of CentiScaPe plug-in and documentation (CentiScaPe 1.0 available).

• PesCa: Path Extraction by Shortest Cost Algorithms

  A plug-in for calculating shortest paths between two nodes in a graph.
  Go to PeSca page to download the latest version of Pesca plug-in and documentation (Pesca 2.0 available).

• Metabolica

  A plug-in for finding network-motifs in a network.
  Go to Metabolica page to download the latest version of Metabolica Cytoscape plug-in (Metabolica 1.0 available).